Replication-competent AAV Serotype 2 (rcAAV2) Detection Kit _ 41327ES

YeasenSKU: 41327ES50

Size: 50 T
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Beskrivelse

The Replication-competent AAV Serotype 2 (rcAAV2) Detection Kit is designed to quantitatively analyze and detect the potential risk of Replication Competent Adeno-associated Virus (rcAAV) in a variety of gene therapy, oncology and vaccine development products using recombinant adeno-associated viral vectors with AAV2 serotype.

This kit is based on the principle of fluorescent probe quantitative PCR, and uses qPCR to detect rAAV terminal

repeat sequence (ITR) (i.e. Reference gene) and rcAAV linked sequence (i.e. Target gene) respectively, realizing the quantitative detection of rAAV and rcAAV at the same time. The kit also contains DNA quantitative references for the reference gene and the target gene (rcAAV2 Reference&Target DNA Control).

Before using this kit, make sure that the sample to be tested also meets the following conditions:

1. The serotype of the adeno-associated virus in the sample to be tested is AAV2;

2. The ITR sequence of the recombinant adeno-associated viral vector rAAV in the sample to be tested needs to be matched with the ITR sequence of rAAV2 as described below:

>rAAV-2/N ITR sequence:

TTGGCCACTCCCTCTCTGCGCGCTCGCTCGCTCACTGAGGCCGGGCGACCAAAGGTCGCCCGACGCCCGGGCTTTGCCCGGGCGGCCTCAGTGAGCGAGCGAGCGCGCAGAGAGGGAGTGGCCAACTCCATCACTAGGGGTTCCT

Features

  • Compliance with regulations: the products are fully validated according to the requirements of Chp, USP, ICH, etc., and their performance is in line with Chinese and foreign regulations and standards;
  • Guarantee of quality: the raw materials of the kits are all self-developed, and the qPCR Mix and other enzyme products are produced in an ultra-clean enzyme factory;
  • High sensitivity: the lower limit of quantification (LLOQ) was 2 copies/uL;
  • High precision: high intra-batch reproducibility CV <10%, small inter-batch variation i.e. intermediate precision CV <15%;
  • Strong specificity: specific detection of rcAAV2 residual DNA without interference from other exogenous genomic DNA;
  • Strong anti-interference: the introduction of internal quality control (Reference) can exclude sample interference, abnormal reaction preparation and other factors, effectively avoiding false negatives.

Application

  • Residual rcAAV2 DNA test in biological products.

Specifications

Sensitivity

2 copies/uL (rang: Referenceand Target are all 2×1012×106copies/μL

Assay Time

~1.5 hours

Assay Principle

Fluorescent probe qPCR method

Required Instruments

Real-time fluorescence quantitative PCR system

Product Performance

Product Performance Validation Program

Reference standards or requirements

YEASEN

1. Standards for the kit

Homemade standards are available

Plasmid DNA containing Reference gene and Target gene

2. Linear Range

Assay Range

Refer to the actual situation

2x101~2x106 copies/μL

R2

≥0.98

≥0.99 and above

Slope

-3.1~-3.8

-3.1~-3.6

Amplification Efficiency

84%~109%

90%~109%

3. Accuracy

Recovery Rate

50%~150%

70%~130% and above

4. Precision

Repeatability

CV≤15%

10%

Intermediate precision

CV≤15%

15%

5. Exclusivity

No interference with DNA from other sources

Specific detection of rcAAV2 DNA without interference from other exogenous DNA

6. Sensitivity

Limit of quantification

Reliable quantification of the smallest concentrations of target substances

2 copies/μL

Limit of detection

Refer to the actual situation

0.125 copies/μL

7. Durability

Reagent Stability

Evaluating the effect of different storage temperatures on reagent performance

2~8°C for 30 days and 37°C for 14 days, and repeated freeze-thaw 10 times, the kit amplification efficiency is in the range of 90%~109%, R2≥0.99 and above

Instrument Compatibility

Kits are used on different devices without affecting the test results

Compatible with many types of qPCR Instruments (eg. Bio-Rad CFX96 Optic Module, Thermo Scientific ABI 7500, ABI Quant Studio 5)

Components

Components No.

Name

41327ES50

41327ES60

41327-A

rcAAV2 qPCR Mix

300 μL×2

600 μL×2

41327-B1

rcAAV2 Reference Primer&probe Mix

200 μL

400 μL

41327-B2

rcAAV2 Target Primer&probe Mix

200 μL

400 μL

41327-C

DNA Dilution Buffer

1.8 mL×2

1.8 mL×4

41327-D

rcAAV2 Reference&Target DNA Control (2×108 copies/μL)

50 μL

100 μL

Storage

This product should be stored at -25~-15℃ for 2 years.

Both 41327-A, 41327-B1 and 41327-B2 should be stored protected from light.

Figures

  • Limit of quantification

rcAAV2 DNA at concentrations of 2×101 copies/uL, 10 copies/uL, 5 copies/μL, 2 copies/μL and 1 copies/uL (with Target DNA and Reference DNA) were detected, with 10 replicates for each concentration, respectively. The results showed that the CV of rcAAV2 DNA was <20% at concentrations of 2copies/μL and above. Therefore, the limit of quantification in the rcAAV2 DNA residue detection kits was 2copies/μL.

Table 1. Limit of quantification (LOQ) assay results for rcAAV2 DNA

 

 

Repetition number

 

Test item

Target (copies/μL)

Reference (copies/μL)

Quantity

Return ratio

Quantity

Return ratio

1

2.34

117.01 %

1.97

98.63 %

2

2.13

106.26 %

1.92

96.22 %

3

2.06

103.24 %

2.45

122.39 %

4

1.99

99.43 %

2.15

107.52 %

5

1.93

96.26 %

1.78

89.14 %

6

1.93

96.56%

2.35

117.72 %

7

2.27

113.69%

1.80

90.16 %

8

2.38

119.10%

1.65

82.39 %

9

2.41

120.73%

1.88

94.25 %

10

1.85

92.43 %

1.83

91.40 %

Average value

2.13

\

1.98

\

CV

9.83%

\

13.87%

\

Figure 1. 2 copies/μL rcAAV2 DNA qPCR assay results

Figure 1. 2 copies/μL rcAAV2 DNA qPCR assay results

  • Limit of detection

The detection of Target and Reference at various concentration points under the quantitative limit, combined with the blank limit requirements, yields the detection limit of the reagent kit. The results show that at concentrations of 0.125 copies/μL and above, in 20 repeated wells, ≥19 wells are detected (i.e., the detection rate is ≥95%). Therefore, the detection limit of the replicative adeno-associated virus serotype 2 (rcAAV2) detection reagent kit can reach 0.125 copies/μL.

Table 2. Limit of detection (LOD) assay results for rcAAV2 DNA

 

 

Ct value

Theoretical concentration

Target (copies/μL)

Reference (copies/μL)

0.25

0.125

0.0625

0.25

0.125

0.0625

Positive count / Total count

20/20

19/20

18/20

20/20

19/20

19/20

Detection rate

100%

95%

90%

100%

95%

95%

 

 

 

 

 

 

 

 

Documents:

Safety Data Sheet

41327_MSDS_HB250310.pdf

Manuals

41327_Manual_Ver.EN20250310.pdf

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